Computational & Data Science Preprint Repository

  • 2024

    • K Biza, A Ntroumpogiannis, S TriantafillouI Tsamardinos (2024) Towards Automated Causal Discovery: a case study on 5G telecommunication data, arXiv preprint arXiv:2402.14481
    • IK Buhl, J Nart, Z Papadovasilakis, S Sørensen, PB Jensen, B Ejlertsen, UH Buhl, I Tsamardinos (2024) Predicting epirubicin response in Danish patients with breast cancer, Journal of Clinical Oncology 42 (16_suppl), 539-539. (html)
    • A Chatzimentor, A Doxa, M Butenschön, T Kristiansen, MA Peck, S Katsanevakis, AD Mazaris (2024) Diving into warming oceans: Assessing 3D climatically suitable foraging areas of loggerhead sea turtles under climate change, Journal for Nature Conservation 79, 126620, https://doi.org/10.1016/j.jnc.2024.126620
    • K Ellrott, CK Wong, C Yau, MA Castro, J Lee, B Karlberg, JK Grewal, V Lagani, B Tercan, V Friedl, T Hinoue, V Uzunangelov, L Westlake, X Loinaz, I Felau, P Wang, A Kemal, SJ Caesar-Johnson, I Shmulevich, AJ Lazar, I Tsamardinos, KA Hoadley, Cancer Genome Atlas Analysis Network, GA Robertson, TA Knijnenburg, CC Benz, JM Stuart, JC Zenklusen, AD Cherniack, PW Laird (2024) Leveraging compact feature sets for TCGA-based molecular subtype classification on new samples, Cancer Research 84 (6_Supplement), 6548-6548. (abstract)
    • J Fagin, G Vernardos, G Tsagkatakis, Y Pantazis, AJ Shajib, M O'Dowd (2024) Measuring the Substructure Mass Power Spectrum of 23 SLACS Strong Galaxy-Galaxy Lenses with Convolutional Neural Networks, Monthly Notices of the Royal Astronomical Society 532 (2), 2248-2269,  https://doi.org/10.1093/mnras/stae1593
    • A Fayomi, Y Pantazis, M Tsagris, ATA Wood (2024) Cauchy robust principal component analysis with applications to high-dimensional data sets, Statistics and Computing 34 (1), 1-14. (html file)
    • I Fotopoulos, OTD Nguyen, TH Nøst, M Markaki, V Lagani, R Mjelle, TM Sandanger, P Sætrom, I Tsamardinos, OD Røe (2024) Promising microRNAs in pre-diagnostic serum associated with lung cancer up to eight years before diagnosis: a HUNT study, Journal of Cancer Research and Clinical Oncology 150 (7), 355. (html)
    • F Goudarzi, A Doxa, MR Hemami, AD Mazaris (2024) Thermal vulnerability of sea turtle foraging grounds around the globe, Communications Biology 7 (1), 347. (html file)
    • G Grekas, CG Makridakis (2024) Deep Ritz-Finite Element methods: Neural Network Methods trained with Finite Elements, arXiv preprint arXiv:2409.08362
    • I Kakogeorgiou, S Gidaris, K Karantzalos, N Komodakis (2024) SPOT: Self-Training with Patch-Order Permutation for Object-Centric Learning with Autoregressive Transformers, Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 22776-22786. (pdf)
    • Y Kamarianakis, Y Pantazis, E Kalligiannaki, TD Katsaounis, K Kotsovos, I Gereige, M Abdullah, A Jamal, A Tzavaras (2024) Robust day-ahead solar forecasting with endogenous data and sliding windows, J. Renewable Sustainable Energy 16 (026103), 1-13. (html file)
    • A Koutsimpela, M Loulakis (2024) Optimal control, viscosity approximation and Arrhenius Law for the shallow lake problem, arXiv preprint arXiv:2401.07642
    • N Myrtakis, I Tsamardinos, V Christophides (2024) AutoML for Explainable Anomaly Detection (XAD), The Provenance of Elegance in Computation-Essays Dedicated to Val Tannen (pdf)
    • OTD Nguyen, Y Fotopoulos, TH Nøst, M Markaki, V Lagani, P Sætrom, I Tsamardinos, OD Røe (2024) Differentially expressed microRNAs in prediagnostic serum linked to lung cancer up to eight years before diagnosis in prospective, population-based cohorts: A HUNT study, Journal of Clinical Oncology 42 (16_suppl), 8041-8041. (html file)
    • OTD Nguyen, Y Fotopoulos, TH Nøst, M Markaki, V Lagani, I Tsamardinos, OD Røe (2024) Effect of novel polygenetic variant of HUNT lung cancer model on lung cancer risk assessment over clinical model among light smokers (average< 9 pack-years), Journal of Clinical Oncology 42 (16_suppl), e20066-e20066 (html file)
    • OTD Nguyen, I Fotopoulos, M Markaki, I Tsamardinos, V Lagani, OD Røe (2024) Improving Lung Cancer Screening Selection: The HUNT Lung Cancer Risk Model for Ever-Smokers Versus the NELSON and 2021 United States Preventive Services Task Force Criteria in the Cohort of Norway: A Population-Based Prospective Study, JTO Clinical and Research Reports 5 (4), 100660. (html file)
    • K Paraschakis, A Castellani, G Borboudakis, I Tsamardinos (2024) Confidence Interval Estimation of Predictive Performance in the Context of AutoML, arXiv preprint arXiv:2406.08099
    • G Paterakis, S Fafalios, P Charonyktakis, V Christophides, I Tsamardinos (2024) Do we really need imputation in AutoML predictive modeling? ACM Transactions on Knowledge Discovery from Data (pdf file)
    • V Perifanis, E Karypidis, N Komodakis, P Efraimidis (2024) SFTC: Machine Unlearning via Selective Fine-tuning and Targeted Confusion, European Interdisciplinary Cybersecurity Conference, 29-36. (pdf)
    • M Schmidt-Mengin, A Benichoux, S Belachew, N Komodakis, N Paragios (2024) ToNNO: Tomographic Reconstruction of a Neural Network's Output for Weakly Supervised Segmentation of 3D Medical Images, Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 11428-11438. (pdf)
    • MA Zervou, E Doutsi, Y Pantazis, P Tsakalides (2024) Multitask Classification of Antimicrobial Peptides for Simultaneous Assessment of Antimicrobial Property and Structural Fold, ICASSP 2024-2024 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 1836-1840. (pdf file)
    • MA Zervou, E Doutsi, Y Pantazis, P Tsakalides (2024) De Novo Antimicrobial Peptide Design with Feedback Generative Adversarial Networks, International Journal of Molecular Sciences 25 (10), 5506 (html)

  • 2023
  • 2022